Download MicrobeMS: Difference between revisions
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MALDI-TOF mass spectra from strains of ''Escherichia coli'' (zip archive, Bruker Daltonics MS data format): | MALDI-TOF mass spectra from strains of ''Escherichia coli'' (zip archive, Bruker Daltonics MS data format): | ||
[ | [https://wiki.microbe-ms.com/uploads/Escherichia.zip '''Escherichia.zip'''] | ||
MALDI-TOF mass spectra from | MALDI-TOF mass spectra from the ''so called'' [https://pubmed.ncbi.nlm.nih.gov/26063856/ '''RKI ring trial study'''] (Matlab data format, structure array ''spec''), <br> | ||
see also [[Data_Format_of_Spectral_Multifiles|Data Format of Spectral Multifiles (*.muf)]]: | see also [[Data_Format_of_Spectral_Multifiles|Data Format of Spectral Multifiles (*.muf)]]: | ||
[ | [https://wiki.microbe-ms.com/uploads/RKI-ring-trial-spectra.muf: '''RKI-ring-trial-spectra.muf'''] | ||
Peak list files obtained from mass spectra of strains of '' | Peak list files obtained from mass spectra of strains of the ''so called'' [https://pubmed.ncbi.nlm.nih.gov/26063856/ '''RKI ring trial study'''] (Matlab data format, structure array ''C''),<br> | ||
see also [[Data_Format_of_Peak_List_Files|Peaks List Files (*.pkf)]] to obtain information on the file format | see also [[Data_Format_of_Peak_List_Files|Peaks List Files (*.pkf)]] to obtain information on the file format | ||
[ | [https://wiki.microbe-ms.com/uploads/RKI-ring-trial-test-data.pkf: '''RKI-ring-trial-test-data.pkf'''] | ||
MS Excel template required to define and transfer metadata items into MicrobeMS,<br> | MS Excel template required to define and transfer metadata items into MicrobeMS,<br> | ||
for file format information see [[Adding / Editing Metadata of MALDI-TOF Mass Spectral Data]]: | for file format information see [[Adding / Editing Metadata of MALDI-TOF Mass Spectral Data]]: | ||
[ | [https://wiki.microbe-ms.com/uploads/MALDI-Fields.xls: '''MALDI-Fields.xls'''] | ||
Download the most actual database versions with microbial MALDI-TOF MS, or synthetic LC-MS libraries: | Download the most actual database versions with microbial MALDI-TOF MS, or synthetic LC-MS libraries: | ||
[[Mass_Spectrometry_Databases |Mass Spectrometry Databases from the RKI at ZENODO]] | [[Mass_Spectrometry_Databases |Mass Spectrometry Databases from the RKI at ZENODO]] | ||
Revision as of 18:13, 15 December 2024
MicrobeMS is available in two different editions: in (i) a stand-alone Windows 64-bit version requiring the Matlab Compiler Runtime (MCR) 64-bit and (ii) a Matlab pcode toolbox version requiring Matlab R2014 (Windows / Linux) or later.
Please note that you accept with downloading the license conditions of MicrobeMS.
MicrobeMS stand-alone (Windows)
Microbe MS 0.84 stand-alone 64-bit version (Windows, February 2022). To download the installer for this edition of MicrobeMS please use the link below:
microbems.v.084.setup.zip
Microbe MS 0.82 stand-alone 64-bit version (Windows) from January 2020:
microbems.v.082.setup.zip
MicrobeMS pcode (Windows and Linux)
NEW - MicrobeMS version 0.87 Matlab pcode for Windows and Linux (June 2024): requires Matlab R2022a or newer
pcode-microbems-v087.zip
MicrobeMS version 0.82 Matlab pcode for Windows and Linux (December 2019):
pcode-microbems-v082.zip
Test Spectra and Databases
MALDI-TOF mass spectra from strains of Escherichia coli (zip archive, Bruker Daltonics MS data format):
Escherichia.zip
MALDI-TOF mass spectra from the so called RKI ring trial study (Matlab data format, structure array spec),
see also Data Format of Spectral Multifiles (*.muf):
RKI-ring-trial-spectra.muf
Peak list files obtained from mass spectra of strains of the so called RKI ring trial study (Matlab data format, structure array C),
see also Peaks List Files (*.pkf) to obtain information on the file format
RKI-ring-trial-test-data.pkf
MS Excel template required to define and transfer metadata items into MicrobeMS,
for file format information see Adding / Editing Metadata of MALDI-TOF Mass Spectral Data:
MALDI-Fields.xls
Download the most actual database versions with microbial MALDI-TOF MS, or synthetic LC-MS libraries:
Mass Spectrometry Databases from the RKI at ZENODO